old_pdb
latest
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old_pdb
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Index
A
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C
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D
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E
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F
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H
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J
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K
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L
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M
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N
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O
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P
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R
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S
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T
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U
A
all_atoms() (old_pdb.coordinates.Model property)
annotate_link() (old_pdb.pdb_entry.Entry method)
Atom (class in old_pdb.coordinates)
atoms() (old_pdb.coordinates.Model property)
Author (class in old_pdb.annotation)
author() (old_pdb.pdb_entry.Entry property)
C
Caveat (class in old_pdb.annotation)
caveat() (old_pdb.pdb_entry.Entry property)
ChainTerminus (class in old_pdb.coordinates)
check_master() (old_pdb.pdb_entry.Entry method)
cis_peptide() (old_pdb.pdb_entry.Entry property)
CisPeptide (class in old_pdb.secondary)
components() (old_pdb.heterogen.Formula property)
Compound (class in old_pdb.annotation)
compound() (old_pdb.pdb_entry.Entry property)
connect() (old_pdb.pdb_entry.Entry property)
Connection (class in old_pdb.bookkeeping)
D
database_reference() (old_pdb.pdb_entry.Entry property)
DatabaseReference (class in old_pdb.primary)
DatabaseReference1 (class in old_pdb.primary)
DatabaseReference2 (class in old_pdb.primary)
disulfide_bond() (old_pdb.pdb_entry.Entry property)
DisulfideBond (class in old_pdb.secondary)
E
Entry (class in old_pdb.pdb_entry)
experimental_data() (old_pdb.pdb_entry.Entry property)
ExperimentalData (class in old_pdb.annotation)
F
find_atom_by_name() (old_pdb.pdb_entry.Entry method)
find_residue() (old_pdb.pdb_entry.Entry method)
Formula (class in old_pdb.heterogen)
frac_transform() (old_pdb.pdb_entry.Entry property)
FractionalTransform (class in old_pdb.crystallography)
H
Header (class in old_pdb.annotation)
header() (old_pdb.pdb_entry.Entry property)
Helix (class in old_pdb.secondary)
helix() (old_pdb.pdb_entry.Entry property)
het_atoms() (old_pdb.coordinates.Model property)
Heterogen (class in old_pdb.heterogen)
heterogen() (old_pdb.pdb_entry.Entry property)
heterogen_formula() (old_pdb.pdb_entry.Entry property)
heterogen_name() (old_pdb.pdb_entry.Entry property)
heterogen_synonym() (old_pdb.pdb_entry.Entry property)
HeterogenAtom (class in old_pdb.coordinates)
HeterogenName (class in old_pdb.heterogen)
HeterogenSynonym (class in old_pdb.heterogen)
J
Journal (class in old_pdb.annotation)
journal() (old_pdb.pdb_entry.Entry property)
K
keyword() (old_pdb.pdb_entry.Entry property)
Keywords (class in old_pdb.annotation)
L
Link (class in old_pdb.secondary)
link() (old_pdb.pdb_entry.Entry property)
M
Master (class in old_pdb.bookkeeping)
master() (old_pdb.pdb_entry.Entry property)
Model (class in old_pdb.coordinates)
model() (old_pdb.pdb_entry.Entry property)
model_type() (old_pdb.pdb_entry.Entry property)
ModelType (class in old_pdb.annotation)
modified_residue() (old_pdb.pdb_entry.Entry property)
ModifiedResidue (class in old_pdb.primary)
module
old_pdb
old_pdb.annotation
old_pdb.bookkeeping
old_pdb.coordinates
old_pdb.crystallography
old_pdb.heterogen
old_pdb.pdb_entry
old_pdb.primary
old_pdb.secondary
N
noncrystal_transform() (old_pdb.pdb_entry.Entry property)
NoncrystalTransform (class in old_pdb.crystallography)
num_atoms() (old_pdb.coordinates.Model method)
(old_pdb.pdb_entry.Entry method)
num_chains() (old_pdb.coordinates.Model method)
(old_pdb.pdb_entry.Entry method)
(old_pdb.primary.SequenceResidues method)
num_model() (old_pdb.pdb_entry.Entry property)
num_residues() (old_pdb.coordinates.Model method)
(old_pdb.pdb_entry.Entry method)
num_ter() (old_pdb.coordinates.Model method)
(old_pdb.pdb_entry.Entry method)
num_transforms() (old_pdb.pdb_entry.Entry method)
NumModels (class in old_pdb.annotation)
O
Obsolete (class in old_pdb.annotation)
obsolete() (old_pdb.pdb_entry.Entry property)
old_pdb
module
old_pdb.annotation
module
old_pdb.bookkeeping
module
old_pdb.coordinates
module
old_pdb.crystallography
module
old_pdb.heterogen
module
old_pdb.pdb_entry
module
old_pdb.primary
module
old_pdb.secondary
module
original_transform() (old_pdb.pdb_entry.Entry property)
OriginalTransform (class in old_pdb.crystallography)
P
parse_file() (old_pdb.pdb_entry.Entry method)
parse_line() (old_pdb.annotation.Author method)
(old_pdb.annotation.Caveat method)
(old_pdb.annotation.Compound method)
(old_pdb.annotation.ExperimentalData method)
(old_pdb.annotation.Header method)
(old_pdb.annotation.Journal method)
(old_pdb.annotation.Keywords method)
(old_pdb.annotation.ModelType method)
(old_pdb.annotation.NumModels method)
(old_pdb.annotation.Obsolete method)
(old_pdb.annotation.Remark method)
(old_pdb.annotation.Revision method)
(old_pdb.annotation.RevisionData method)
(old_pdb.annotation.Site method)
(old_pdb.annotation.Source method)
(old_pdb.annotation.Split method)
(old_pdb.annotation.Supersedes method)
(old_pdb.annotation.Title method)
(old_pdb.bookkeeping.Connection method)
(old_pdb.bookkeeping.Master method)
(old_pdb.coordinates.Atom method)
(old_pdb.coordinates.ChainTerminus method)
(old_pdb.coordinates.HeterogenAtom method)
(old_pdb.coordinates.Model method)
(old_pdb.coordinates.TemperatureFactor method)
(old_pdb.crystallography.FractionalTransform method)
(old_pdb.crystallography.NoncrystalTransform method)
(old_pdb.crystallography.OriginalTransform method)
(old_pdb.crystallography.UnitCell method)
(old_pdb.heterogen.Formula method)
(old_pdb.heterogen.Heterogen method)
(old_pdb.heterogen.HeterogenName method)
(old_pdb.heterogen.HeterogenSynonym method)
(old_pdb.pdb_entry.Entry method)
(old_pdb.primary.DatabaseReference method)
(old_pdb.primary.DatabaseReference1 method)
(old_pdb.primary.DatabaseReference2 method)
(old_pdb.primary.ModifiedResidue method)
(old_pdb.primary.SequenceDifferences method)
(old_pdb.primary.SequenceResidues method)
(old_pdb.secondary.CisPeptide method)
(old_pdb.secondary.DisulfideBond method)
(old_pdb.secondary.Helix method)
(old_pdb.secondary.Link method)
(old_pdb.secondary.Sheet method)
R
Remark (class in old_pdb.annotation)
remark() (old_pdb.pdb_entry.Entry property)
residues() (old_pdb.primary.SequenceResidues property)
Revision (class in old_pdb.annotation)
revision_data() (old_pdb.pdb_entry.Entry property)
RevisionData (class in old_pdb.annotation)
revisions() (old_pdb.annotation.RevisionData property)
S
sequence_difference() (old_pdb.pdb_entry.Entry property)
sequence_residue() (old_pdb.pdb_entry.Entry property)
SequenceDifferences (class in old_pdb.primary)
SequenceResidues (class in old_pdb.primary)
setter() (old_pdb.pdb_entry.Entry property)
Sheet (class in old_pdb.secondary)
sheet() (old_pdb.pdb_entry.Entry property)
Site (class in old_pdb.annotation)
Source (class in old_pdb.annotation)
source() (old_pdb.pdb_entry.Entry property)
Split (class in old_pdb.annotation)
split() (old_pdb.pdb_entry.Entry property)
Supersedes (class in old_pdb.annotation)
supersedes() (old_pdb.pdb_entry.Entry property)
T
TemperatureFactor (class in old_pdb.coordinates)
Title (class in old_pdb.annotation)
title() (old_pdb.pdb_entry.Entry property)
U
unit_cell() (old_pdb.pdb_entry.Entry property)
UnitCell (class in old_pdb.crystallography)
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